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Abstract Permafrost thaw alters groundwater flow, river hydrology, stream‐catchment interactions, and the availability of carbon and nutrients in headwater streams. The impact of permafrost on watershed hydrology and biogeochemistry of headwater streams has been demonstrated, but there is little understanding of how permafrost influences fish in these ecosystems. We examined relations among permafrost characteristics, the resulting changes in water temperature, stream hydrology (e.g., discharge flashiness), and macroinvertebrates, with the abundance, biomass, and energy density of juvenile Dolly Varden (Salvelinus malma) and Arctic Grayling (Thymallus arcticus) across 10 headwater streams in northwestern Alaska. Macroinvertebrate density was driven by concentrations of dissolved carbon and nutrients supporting stream food webs. Dolly Varden abundance was primarily related to water temperature with fewer fish in warmer streams, whereas Dolly Varden energy density decreased with the flashiness of the headwater streams. Dolly Varden biomass was related to both temperature and bottom‐up food web effects. The energy density of Arctic Grayling decreased with warmer temperatures and discharge flashiness. These relations demonstrate the importance of terrestrial–aquatic connections in permafrost landscapes and indicate the complexity of landscape effects on fish. Because permafrost thaw is one of the most impactful changes occurring as the Arctic warms, an improved understanding of how stream temperature, hydrology, and bottom‐up food web processes influence fish populations can aid forecasting of future conditions across the Arctic. 

Abstract Climate change in the Arctic is altering watershed hydrologic processes and biogeochemistry. Here, we present an emergent threat to Arctic watersheds based on observations from 75 streams in Alaska’s Brooks Range that recently turned orange, reflecting increased loading of iron and toxic metals. Using remote sensing, we constrain the timing of stream discoloration to the last 10 years, a period of rapid warming and snowfall, suggesting impairment is likely due to permafrost thaw. Thawing permafrost can foster chemical weathering of minerals, microbial reduction of soil iron, and groundwater transport of metals to streams. Compared to clear reference streams, orange streams have lower pH, higher turbidity, and higher sulfate, iron, and trace metal concentrations, supporting sulfide mineral weathering as a primary mobilization process. Stream discoloration was associated with dramatic declines in macroinvertebrate diversity and fish abundance. These findings have considerable implications for drinking water supplies and subsistence fisheries in rural Alaska. 

Permafrost holds more than twice the amount of carbon currently in the atmosphere, but this large carbon reservoir is vulnerable to thaw and erosion under a rapidly changing Arctic climate. Convective storms are becoming increasingly common during Arctic summers and can amplify runoff and erosion. These extreme events, in concert with active layer deepening, may accelerate carbon loss from the Arctic landscape. However, we lack measurements of carbon fluxes during these events. Rivers are sensitive to physical, chemical, and hydrological perturbations, and thus are excellent systems for studying landscape responses to thunderstorms. We present observations from the Canning River, Alaska, which drains the northern Brooks Range and flows across a continuous permafrost landscape to the Beaufort Sea. During summer 2022 and 2023 field campaigns, we opportunistically monitored river discharge, sediment, and organic carbon fluxes during several thunderstorms. During one notable storm, river discharge nearly doubled from ~130 m3/s to ~240 m3/s, suspended sediment flux increased 70-fold, and the particulate organic carbon (POC) flux increased 90-fold relative to non-storm conditions. Taken together, the river exported ~16 metric tons of POC over one hour of this sustained event, not including the additional flux of woody debris. Furthermore, the dissolved organic carbon (DOC) flux nearly doubled. Although these thunderstorm-driven fluxes are short-lived (hours to days), they play an outsized role in exporting organic carbon from Arctic rivers. Understanding how these extreme events impact river water, sediment, and carbon dynamics will help predict how Arctic climate change will modify the global carbon cycle. 

This data release includes continuous measurements of stream temperature and specific conductance from 24 sites on the Yukon River and other arctic rivers in Alaska. Measurements were collected at selected U.S. Geological Survey stream gages and in communities along major rivers. 

High spatial and temporal resolution models are essential for understanding future climate impacts and developing effective climate resilience plans. However, existing regional and global river models often lack the resolution needed to accurately capture local conditions. This study uses a series of high-resolution models, including the Regional Arctic System Model, mizuRoute, and the river basin model, to analyze Arctic and sub-Arctic Alaskan hydrology. We compare a historical baseline (1991–2020) with six midcentury (2035–64) futures: two pseudo–global warming scenarios based on historical meteorology and four direct dynamically downscaled global climate models. The six futures reveal significant uncertainty in future annual discharge and peak flows, although a widespread increase in discharge during April (+63%) and October (+31%) is consistently shown across models. Projected increases in rain and shifting weather patterns lead to a transition from snow to rain in spring and autumn, reducing the fraction of snowmelt contributing to river discharge. Rising evapotranspiration moderates discharge changes, particularly in autumn, by offsetting precipitation increases. Average summer river temperatures are projected to increase by approximately 1.5°C, doubling the number of river segments that experience 18°C days, a critical threshold for salmon survival, and intensifying the heat flux to the ocean adding an average of 3.3 × 10¹²MJ yr⁻¹. These changes in the hydrologic cycle could profoundly impact riverine and oceanic ecosystems, posing substantial challenges to communities reliant on these environments. Significance StatementThe purpose of this study is to enhance our understanding of the midcentury climate change impacts on the Alaskan hydrologic cycle. In all six of the potential future scenarios, river flows in spring and autumn are predicted to increase and river temperatures are projected to be warmer throughout the year. These changes are significant as higher river temperatures could jeopardize fish survival. Additionally, the combined effect of increased river water and higher temperatures during spring and autumn will contribute more heat to the ocean, possibly reducing nearshore sea ice. This is crucial because many communities depend on rivers and sea ice for transportation and subsistence activities. 

Abstract Earth System Models (ESM)are crucial for quantifying climate impacts across Earth's interconnected systems and supporting science‐based adaptation and mitigation. However, not including end‐users, especially decision‐makers representing communities vulnerable to climate change, can limit model utility, increase epistemic risks, and lead to information misuse in decision‐making. While the ESM community increasingly values broad community engagement, end‐users may not initially perceive models as useful for local planning. Co‐designing models with end‐users fosters two‐way learning: users better understand models and their outputs, while modelers gain insights into fine‐scale local processes like monitoring practices and management priorities. Higher‐level co‐design can lead to more customized, priority‐driven, and useful modeling products. Despite these benefits, modelers often struggle to initiate meaningful partnerships with local communities. Therefore, this paper explores model co‐design from the perspective of modelers. This study presents two case studies where modelers and social scientists collaborated with Indigenous communities' decision‐makers to reflect their priorities in model design and application. In the Arctic Rivers Project, high‐resolution climate and hydrology data sets for Alaska were developed with guidance from an Indigenous Advisory Council, using optimized, coupled land‐atmosphere models. In the Mid‐Klamath Project, we partnered with the Karuk Tribe's Department of Natural Resources to assess climate change and prescribed burning impacts on terrestrial hydrology in the Klamath River Basin. Drawing from these studies, we introduce a four‐level framework: (a) Co‐design Configuration; (b) Model Tuning; (c) Incorporate Contextual Knowledge; (d) Co‐develop New Model Functions. We aim to help researchers consider and compare co‐design across diverse modeling projects systematically and coherently. 

Abstract In recent decades the habitat of North American beaver (Castor canadensis) has expanded from boreal forests into Arctic tundra ecosystems. Beaver ponds in Arctic watersheds are known to alter stream biogeochemistry, which is likely coupled with changes in the activity and composition of microbial communities inhabiting beaver pond sediments. We investigated bacterial, archaeal, and fungal communities in beaver pond sediments along tundra streams in northwestern Alaska (AK), USA and compared them to those of tundra lakes and streams in north‐central Alaska that are unimpacted by beavers.β‐glucosidase activity assays indicated higher cellulose degradation potential in beaver ponds than in unimpacted streams and lakes within a watershed absent of beavers. Beta diversity analyses showed that dominant lineages of bacteria and archaea in beaver ponds differed from those in tundra lakes and streams, but dominant fungal lineages did not differ between these sample types. Beaver pond sediments displayed lower relative abundances of Crenarchaeota and Euryarchaeota archaea and of bacteria from typically anaerobic taxonomic groups, suggesting differences in rates of fermentative organic matter (OM) breakdown, syntrophy, and methane generation. Beaver ponds also displayed low relative abundances of Chytridiomycota (putative non‐symbiotic) fungi and high relative abundances of ectomycorrhizal (plant symbionts) Basidiomycota fungi, suggesting differences in the occurrence of plant and fungi mutualistic interactions. Beaver ponds also featured microbes with taxonomic identities typically associated with the cycling of nitrogen and sulfur compounds in higher relative abundances than tundra lakes and streams. These findings help clarify the microbiological implications of beavers expanding into high latitude regions. 

Beavers build dams that change the way water moves between streams, lakes, and the land. In Alaska, beavers are moving north from the forests into the Arctic tundra. When beavers build dams in the Arctic, they cause frozen soil, called permafrost, to thaw. Scientists are studying how beavers and the thawing of permafrost are impacting streams and rivers in Alaska’s national parks. For example, permafrost thaw from beavers can add harmful substances like mercury to streams. Mercury can be taken up by stream food webs, including fish, which then become unhealthy to eat. Permafrost thaw can also move carbon (from dead plants) to beaver ponds. When this carbon decomposes, it can be released from beaver ponds into the air as greenhouse gases, which cause Earth’s climate to warm. Scientists are trying to keep up with these busy beavers to better understand how they are changing Arctic landscapes and Earth’s climate. 

Abstract Arctic hydrology is experiencing rapid changes including earlier snow melt, permafrost degradation, increasing active layer depth, and reduced river ice, all of which are expected to lead to changes in stream flow regimes. Recently, long-term (>60 years) climate reanalysis and river discharge observation data have become available. We utilized these data to assess long-term changes in discharge and their hydroclimatic drivers. River discharge during the cold season (October–April) increased by 10% per decade. The most widespread discharge increase occurred in April (15% per decade), the month of ice break-up for the majority of basins. In October, when river ice formation generally begins, average monthly discharge increased by 7% per decade. Long-term air temperature increases in October and April increased the number of days above freezing (+1.1 d per decade) resulting in increased snow ablation (20% per decade) and decreased snow water equivalent (−12% per decade). Compared to the historical period (1960–1989), mean April and October air temperature in the recent period (1990–2019) have greater correlation with monthly discharge from 0.33 to 0.68 and 0.0–0.48, respectively. This indicates that the recent increases in air temperature are directly related to these discharge changes. Ubiquitous increases in cold and shoulder-season discharge demonstrate the scale at which hydrologic and biogeochemical fluxes are being altered in the Arctic. 

Abstract Climate change is thawing and potentially mobilizing vast quantities of organic carbon (OC) previously stored for millennia in permafrost soils of northern circumpolar landscapes. Climate‐driven increases in fire and thermokarst may play a key role in OC mobilization by thawing permafrost and promoting transport of OC. Yet, the extent of OC mobilization and mechanisms controlling terrestrial‐aquatic transfer are unclear. We demonstrate that hydrologic transport of soil dissolved OC (DOC) from the active layer and thawing permafrost to headwater streams is extremely heterogeneous and regulated by the interactions of soils, seasonal thaw, fire, and thermokarst. Repeated sampling of streams in eight headwater catchments of interior Alaska showed that the mean age of DOC for each stream ranges widely from modern to ∼2,000 years B.P. Together, an endmember mixing model and nonlinear, generalized additive models demonstrated that Δ¹⁴C‐DOC signature (and mean age) increased from spring to fall, and was proportional to hydrologic contributions from a solute‐rich water source, related to presumed deeper flow paths found predominantly in silty catchments. This relationship was correlated with and mediated by catchment properties. Mean DOC ages were older in catchments with >50% burned area, indicating that fire is also an important explanatory variable. These observations underscore the high heterogeneity in aged C export and difficulty of extrapolating estimates of permafrost‐derived DOC export from watersheds to larger scales. Our results provide the foundation for developing a conceptual model of permafrost DOC export necessary for advancing understanding and prediction of land‐water C exchange in changing boreal landscapes.